Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Cux1P53564 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cux1P53564 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm15621-201ENSMUST00000119162 364 ntBASIC10.53□□□□□ -0.72
Cux1P53564 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC10.53□□□□□ -0.72
Cux1P53564 Mir1960-201ENSMUST00000157488 78 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC10.53□□□□□ -0.72
Cux1P53564 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Gm29234-201ENSMUST00000187452 1262 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC10.53□□□□□ -0.72
Cux1P53564 Igkv4-73-201ENSMUST00000199760 358 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Gm18851-201ENSMUST00000210087 1058 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm5119-201ENSMUST00000215858 634 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Gm5831-201ENSMUST00000216016 1209 ntBASIC10.53□□□□□ -0.72
Cux1P53564 AC151904.3-201ENSMUST00000219266 895 ntBASIC10.53□□□□□ -0.72
Cux1P53564 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC10.53□□□□□ -0.72
Cux1P53564 AC140930.1-201ENSMUST00000221889 389 ntBASIC10.53□□□□□ -0.72
Cux1P53564 CT030645.2-201ENSMUST00000224321 1012 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cux1P53564 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Cux1P53564 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cux1P53564 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cux1P53564 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Cux1P53564 Gm37525-201ENSMUST00000193499 2871 ntBASIC10.52□□□□□ -0.72
Cux1P53564 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Cux1P53564 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Gm14746-201ENSMUST00000120309 741 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC10.52□□□□□ -0.73
Cux1P53564 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Gm4997-201ENSMUST00000154056 360 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Gm21542-201ENSMUST00000182307 993 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC10.52□□□□□ -0.73
Cux1P53564 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Gm9231-201ENSMUST00000220817 1009 ntBASIC10.52□□□□□ -0.73
Cux1P53564 CT009556.1-201ENSMUST00000227282 449 ntBASIC10.52□□□□□ -0.73
Cux1P53564 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Cux1P53564 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cux1P53564 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cux1P53564 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cux1P53564 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms