Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm29813-201ENSMUST00000195856 447 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 AC161586.1-201ENSMUST00000223232 547 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 Gm26226-201ENSMUST00000082509 116 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm6866-201ENSMUST00000188559 2549 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm45807-201ENSMUST00000209142 2874 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm18878-201ENSMUST00000223071 1443 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm7146-201ENSMUST00000116079 739 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm13033-201ENSMUST00000117591 1057 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm11624-201ENSMUST00000118579 1041 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Col18a1P39061 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm28975-201ENSMUST00000186412 686 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm45122-201ENSMUST00000206376 784 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm31166-201ENSMUST00000209326 288 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC9.09□□□□□ -0.95
Col18a1P39061 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm9315-201ENSMUST00000222696 908 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 AC122356.1-202ENSMUST00000227328 2758 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 AC138284.3-201ENSMUST00000217345 4663 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.09□□□□□ -0.95
Col18a1P39061 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm44215-201ENSMUST00000204910 2711 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm4732-201ENSMUST00000118778 473 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm15781-201ENSMUST00000120216 323 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 AC112956.1-201ENSMUST00000213563 492 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC9.09□□□□□ -0.95
Col18a1P39061 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Col18a1P39061 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Col18a1P39061 Gm12388-201ENSMUST00000119112 1887 ntBASIC9.09□□□□□ -0.96
Col18a1P39061 AC140393.3-201ENSMUST00000228396 1352 ntBASIC9.09□□□□□ -0.96
Col18a1P39061 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Col18a1P39061 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm14615-201ENSMUST00000117575 1816 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Col18a1P39061 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Col18a1P39061 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm44883-201ENSMUST00000206063 3258 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm14739-201ENSMUST00000120424 802 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 AC153800.1-201ENSMUST00000219212 365 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 AC154646.1-201ENSMUST00000225011 1092 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 AC158981.3-201ENSMUST00000226844 1024 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm42479-201ENSMUST00000198654 1356 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Col18a1P39061 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Col18a1P39061 Gm43336-201ENSMUST00000200487 4504 ntBASIC9.08□□□□□ -0.96
Col18a1P39061 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms