Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm8925-201ENSMUST00000197212 763 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm43812-202ENSMUST00000202701 581 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm9685-201ENSMUST00000211275 538 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm7239-201ENSMUST00000220981 860 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 AC125543.2-201ENSMUST00000222114 105 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 CT030170.7-201ENSMUST00000223372 103 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdx1P18111 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdx1P18111 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 AC166341.5-201ENSMUST00000222206 1400 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdx1P18111 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm14891-201ENSMUST00000117378 596 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm13526-201ENSMUST00000117970 189 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm15047-201ENSMUST00000118891 454 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm4918-201ENSMUST00000119420 1084 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm14465-201ENSMUST00000120603 567 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm13121-201ENSMUST00000120637 632 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm12967-201ENSMUST00000122147 289 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm24923-201ENSMUST00000178201 88 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm5973-201ENSMUST00000178542 496 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm26587-201ENSMUST00000180795 989 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm5181-201ENSMUST00000183140 971 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm7560-201ENSMUST00000187748 873 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm29273-201ENSMUST00000188880 262 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm37469-201ENSMUST00000193728 890 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm43590-201ENSMUST00000195987 387 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm42464-201ENSMUST00000196717 417 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm43471-201ENSMUST00000197550 467 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm7542-201ENSMUST00000201140 777 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm18226-201ENSMUST00000215261 521 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 CT030260.1-201ENSMUST00000223243 442 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdx1P18111 AC154838.3-201ENSMUST00000228876 965 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdx1P18111 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Cdx1P18111 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.69□□□□□ -1.5
Cdx1P18111 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdx1P18111 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms