Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm5147-201ENSMUST00000185999 794 ntBASIC6.87□□□□□ -1.31
Lire1P11260 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.87□□□□□ -1.31
Lire1P11260 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm43840-201ENSMUST00000199444 484 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.87□□□□□ -1.31
Lire1P11260 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.87□□□□□ -1.31
Lire1P11260 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Gm18503-201ENSMUST00000220340 728 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm18601-201ENSMUST00000220831 634 ntBASIC6.87□□□□□ -1.31
Lire1P11260 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.87□□□□□ -1.31
Lire1P11260 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Lire1P11260 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Lire1P11260 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Lire1P11260 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Lire1P11260 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Lire1P11260 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm13255-201ENSMUST00000117255 547 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm12642-201ENSMUST00000121098 876 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm12140-201ENSMUST00000121214 544 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm23663-201ENSMUST00000158045 80 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm22687-201ENSMUST00000158301 105 ntBASIC6.86□□□□□ -1.31
Lire1P11260 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm28983-201ENSMUST00000186685 614 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm28150-201ENSMUST00000187305 614 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm28377-201ENSMUST00000189695 720 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm29435-201ENSMUST00000191310 689 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Gm26413-201ENSMUST00000196783 126 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm34701-201ENSMUST00000204213 849 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm45070-201ENSMUST00000208100 246 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm18559-201ENSMUST00000208249 604 ntBASIC6.86□□□□□ -1.31
Lire1P11260 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm19161-201ENSMUST00000217958 737 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Diaph3-204ENSMUST00000226254 682 ntBASIC6.86□□□□□ -1.31
Lire1P11260 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Lire1P11260 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Gm25926-201ENSMUST00000082899 160 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.86□□□□□ -1.31
Lire1P11260 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Lire1P11260 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.86□□□□□ -1.31
Lire1P11260 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lire1P11260 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.85□□□□□ -1.31
Lire1P11260 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC6.85□□□□□ -1.31
Lire1P11260 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lire1P11260 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms