Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm24069-201ENSMUST00000104512 127 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm11821-201ENSMUST00000117335 979 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm15618-201ENSMUST00000121610 452 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm27601-201ENSMUST00000184794 127 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm30708-201ENSMUST00000202183 312 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm8637-201ENSMUST00000212919 1085 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 AC154806.1-203ENSMUST00000227370 1032 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.58□□□□□ -0.4
Ccdc180J3QNE4 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm27005-201ENSMUST00000182783 921 ntBASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm11799-201ENSMUST00000116110 460 ntBASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm23740-201ENSMUST00000157385 100 ntBASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gm7166-201ENSMUST00000199715 303 ntBASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc180J3QNE4 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 AC159195.2-201ENSMUST00000223670 3757 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Gm44916-201ENSMUST00000208664 2194 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Gm37689-201ENSMUST00000193139 275 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 AC122290.1-201ENSMUST00000225631 1078 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Gm24621-201ENSMUST00000082679 140 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Gm12021-201ENSMUST00000121061 1746 ntBASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc180J3QNE4 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Gm6977-201ENSMUST00000121568 512 ntBASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 CT030645.2-201ENSMUST00000224321 1012 ntBASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc180J3QNE4 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms