Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm37960-201ENSMUST00000192402 1897 ntBASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col6a3E9PWQ3 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm29745-201ENSMUST00000198005 687 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm46364-201ENSMUST00000218548 319 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm44007-201ENSMUST00000203845 2189 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Mir5125-201ENSMUST00000175240 79 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm17997-201ENSMUST00000211801 840 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm8049-201ENSMUST00000214336 1782 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm16128-201ENSMUST00000117855 626 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm12983-201ENSMUST00000120974 310 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm23343-201ENSMUST00000158964 143 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm37322-201ENSMUST00000193409 337 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm38291-201ENSMUST00000193671 259 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm7463-201ENSMUST00000201541 547 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm44178-201ENSMUST00000205229 2930 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.61□□□□□ -1.35
Col6a3E9PWQ3 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm15422-201ENSMUST00000117453 541 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm8358-201ENSMUST00000167222 555 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm37631-201ENSMUST00000192275 364 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm18442-201ENSMUST00000220925 639 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms