Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ube3bQ9ES34 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ube3bQ9ES34 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.3□□□□□ -0.92
Ube3bQ9ES34 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.3□□□□□ -0.92
Ube3bQ9ES34 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm43292-201ENSMUST00000199580 2449 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm6490-201ENSMUST00000111862 461 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Mir669e-201ENSMUST00000117003 119 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm6491-201ENSMUST00000118273 990 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm15094-201ENSMUST00000118394 1131 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm15047-201ENSMUST00000118891 454 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm14824-201ENSMUST00000119421 737 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm13495-201ENSMUST00000121156 537 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm14369-201ENSMUST00000121355 285 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm13194-201ENSMUST00000142299 311 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm26182-201ENSMUST00000157688 116 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm24198-201ENSMUST00000157812 108 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm17198-201ENSMUST00000171792 1154 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm22408-201ENSMUST00000174925 65 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm8403-201ENSMUST00000189712 1298 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm29138-201ENSMUST00000191444 348 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm43590-201ENSMUST00000195987 387 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm43382-201ENSMUST00000198954 838 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm43542-201ENSMUST00000199505 379 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm44404-201ENSMUST00000203979 636 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm4374-201ENSMUST00000204929 424 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm44940-201ENSMUST00000206225 1247 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm45673-201ENSMUST00000210293 358 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm6885-201ENSMUST00000217261 372 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm19340-201ENSMUST00000221995 345 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 AC154851.2-201ENSMUST00000222172 644 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ube3bQ9ES34 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm43515-201ENSMUST00000197930 2141 ntBASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ube3bQ9ES34 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms