Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Gm23018-201ENSMUST00000177928 109 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm43664-201ENSMUST00000196038 734 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm10416-201ENSMUST00000197379 645 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm24451-201ENSMUST00000083353 133 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 CT025675.1-201ENSMUST00000228171 1567 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm12104-201ENSMUST00000120359 979 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm15158-201ENSMUST00000120577 570 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm11726-201ENSMUST00000121028 424 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Mir1930-201ENSMUST00000158799 84 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Mir7011-201ENSMUST00000183768 73 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm19056-201ENSMUST00000218220 797 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc47Q9D024 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm11581-201ENSMUST00000122024 763 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm17022-201ENSMUST00000166415 922 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm24756-201ENSMUST00000177002 96 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm28114-201ENSMUST00000187232 379 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm19175-201ENSMUST00000199895 916 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm5305-201ENSMUST00000204010 746 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc47Q9D024 Gm26130-201ENSMUST00000083171 138 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms