Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm6166-201ENSMUST00000098689 409 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 AC163296.2-201ENSMUST00000220177 1315 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm14904-201ENSMUST00000117067 335 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm12944-201ENSMUST00000119262 463 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm15538-201ENSMUST00000121410 313 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm23740-201ENSMUST00000157385 100 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm9556-201ENSMUST00000182938 940 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm5147-201ENSMUST00000185999 794 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm8101-201ENSMUST00000192796 478 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm38337-201ENSMUST00000193986 599 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm9419-201ENSMUST00000200672 567 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm43371-201ENSMUST00000202838 1031 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm9240-201ENSMUST00000206527 742 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm44566-201ENSMUST00000207638 304 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm44982-201ENSMUST00000208795 471 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm18960-201ENSMUST00000222962 713 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.82□□□□□ -1.32
Msh4Q99MT2 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Msh4Q99MT2 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm8421-201ENSMUST00000119439 305 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm22024-201ENSMUST00000122733 287 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm10913-201ENSMUST00000133732 463 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm2709-201ENSMUST00000142979 350 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm2976-201ENSMUST00000160362 513 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Mir199b-201ENSMUST00000175066 110 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm23018-201ENSMUST00000177928 109 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm17786-201ENSMUST00000182000 427 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Mir6357-201ENSMUST00000184246 104 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm44147-201ENSMUST00000204658 94 ntBASIC6.81□□□□□ -1.32
Msh4Q99MT2 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.81□□□□□ -1.32
Msh4Q99MT2 Gm2398-201ENSMUST00000218347 883 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms