Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc28aQ8CEI3 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc28aQ8CEI3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.16□□□□□ -1.26
Ccdc28aQ8CEI3 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Ccdc28aQ8CEI3 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ccdc28aQ8CEI3 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm22470-201ENSMUST00000104117 130 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm13222-201ENSMUST00000119638 138 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm15129-201ENSMUST00000119673 279 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm8916-201ENSMUST00000119732 949 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm24782-201ENSMUST00000157641 132 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm25082-201ENSMUST00000177296 255 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Mir8120-201ENSMUST00000185035 139 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 AC134913.1-201ENSMUST00000224563 504 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ccdc28aQ8CEI3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Ccdc28aQ8CEI3 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm6490-201ENSMUST00000111862 461 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm11987-201ENSMUST00000118524 381 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm11383-201ENSMUST00000121346 807 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm11581-201ENSMUST00000122024 763 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Mir6922-201ENSMUST00000185099 66 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm28801-201ENSMUST00000188761 449 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm17950-201ENSMUST00000214617 646 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gm17611-202ENSMUST00000220613 814 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.14□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms