Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15778-201ENSMUST00000118469 608 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm13006-201ENSMUST00000118683 214 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm12583-201ENSMUST00000120677 853 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm26323-201ENSMUST00000157743 175 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm20430-201ENSMUST00000172474 207 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm36928-201ENSMUST00000192466 694 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm37325-201ENSMUST00000194971 694 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm42573-201ENSMUST00000202327 478 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm45198-201ENSMUST00000206796 591 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm11371-201ENSMUST00000120294 385 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm23657-201ENSMUST00000122623 294 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm3208-201ENSMUST00000168281 427 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Mir199b-201ENSMUST00000175066 110 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm24923-201ENSMUST00000178201 88 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm27019-201ENSMUST00000183056 404 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Mir6357-201ENSMUST00000184246 104 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm37689-201ENSMUST00000193139 275 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm37349-201ENSMUST00000194205 624 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm20274-201ENSMUST00000206967 584 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm34424-201ENSMUST00000213400 782 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 AV026068-219ENSMUST00000224148 933 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ccdc40Q8BI79 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ccdc40Q8BI79 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms