Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm28467-201ENSMUST00000190981 318 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm45705-201ENSMUST00000211831 2134 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm7435-202ENSMUST00000216003 2424 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm22774-201ENSMUST00000102084 109 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Snora35-201ENSMUST00000104579 128 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm12842-201ENSMUST00000117298 476 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm4773-201ENSMUST00000120392 702 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm19840-201ENSMUST00000169624 882 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm8480-201ENSMUST00000190350 698 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm37463-201ENSMUST00000193819 796 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm7825-201ENSMUST00000204046 416 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm25682-201ENSMUST00000083942 164 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm3822-201ENSMUST00000201941 2935 ntBASIC6.02□□□□□ -1.45
Rif1Q6PR54 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rif1Q6PR54 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm13811-201ENSMUST00000117800 256 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm4919-201ENSMUST00000117825 604 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm14805-201ENSMUST00000120172 340 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm11804-201ENSMUST00000121663 468 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm15644-201ENSMUST00000121764 387 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm25574-201ENSMUST00000175245 249 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm28846-201ENSMUST00000189161 368 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm29145-201ENSMUST00000189914 456 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm29454-201ENSMUST00000190805 393 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm6077-201ENSMUST00000196008 499 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm32983-201ENSMUST00000208500 505 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 CT009530.1-201ENSMUST00000227348 2927 ntBASIC6.01□□□□□ -1.45
Rif1Q6PR54 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rif1Q6PR54 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms