Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm15073-201ENSMUST00000117432 634 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Gm12734-201ENSMUST00000120228 948 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Gm12685-201ENSMUST00000121702 214 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
AtmQ62388 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
AtmQ62388 Gm27018-201ENSMUST00000181136 225 ntBASIC6.33□□□□□ -1.4
AtmQ62388 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
AtmQ62388 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.33□□□□□ -1.4
AtmQ62388 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm17142-201ENSMUST00000164933 645 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
AtmQ62388 Gm20223-201ENSMUST00000199932 805 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Gm33601-201ENSMUST00000210001 961 ntBASIC6.33□□□□□ -1.4
AtmQ62388 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Trio-210ENSMUST00000227337 6375 ntBASIC6.33□□□□□ -1.4
AtmQ62388 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
AtmQ62388 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
AtmQ62388 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gm25717-201ENSMUST00000158631 353 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm3008-201ENSMUST00000160566 571 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm27409-201ENSMUST00000184727 80 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm8009-201ENSMUST00000191672 436 ntBASIC6.32□□□□□ -1.4
AtmQ62388 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.32□□□□□ -1.4
AtmQ62388 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
AtmQ62388 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
AtmQ62388 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.32□□□□□ -1.4
AtmQ62388 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
AtmQ62388 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.32□□□□□ -1.4
AtmQ62388 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm15120-201ENSMUST00000120602 301 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.32□□□□□ -1.4
AtmQ62388 Gm37841-201ENSMUST00000195367 376 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm5853-201ENSMUST00000197183 632 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm18430-201ENSMUST00000197534 682 ntBASIC6.32□□□□□ -1.4
AtmQ62388 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gm45874-201ENSMUST00000212423 346 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gm16335-201ENSMUST00000077495 309 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
AtmQ62388 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
AtmQ62388 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
AtmQ62388 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.32□□□□□ -1.4
AtmQ62388 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
AtmQ62388 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms