Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm23768-201ENSMUST00000104440 131 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm8812-201ENSMUST00000118496 412 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm24228-201ENSMUST00000158829 129 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm28958-201ENSMUST00000185864 703 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm7804-202ENSMUST00000194187 854 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm7452-201ENSMUST00000200764 788 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm44565-201ENSMUST00000208194 269 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm45279-201ENSMUST00000210315 391 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm18040-201ENSMUST00000217922 827 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm2840-201ENSMUST00000048361 411 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.08□□□□□ -1.44
Nkx3-1P97436 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx3-1P97436 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Mir697-201ENSMUST00000102316 109 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm11501-201ENSMUST00000118039 581 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm5166-201ENSMUST00000121332 573 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm11434-201ENSMUST00000122379 629 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm15242-201ENSMUST00000122459 283 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm20530-201ENSMUST00000174261 254 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28739-201ENSMUST00000185415 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28219-201ENSMUST00000185452 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28542-201ENSMUST00000185545 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28303-201ENSMUST00000185642 747 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm29244-201ENSMUST00000185825 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm29437-201ENSMUST00000185865 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm29412-201ENSMUST00000185869 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28910-201ENSMUST00000185921 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28812-201ENSMUST00000185963 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm29468-201ENSMUST00000185978 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28335-201ENSMUST00000186204 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28854-201ENSMUST00000186218 696 ntBASIC6.07□□□□□ -1.44
Nkx3-1P97436 Gm28636-201ENSMUST00000186353 696 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms