Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SgcbP82349 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SgcbP82349 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SgcbP82349 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SgcbP82349 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SgcbP82349 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SgcbP82349 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm9408-201ENSMUST00000197375 1505 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC7.03□□□□□ -1.28
SgcbP82349 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SgcbP82349 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm22032-201ENSMUST00000116946 116 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm11649-201ENSMUST00000118214 375 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm14645-201ENSMUST00000118597 417 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm13440-201ENSMUST00000121665 496 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm25845-201ENSMUST00000122588 310 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm13194-201ENSMUST00000142299 311 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.03□□□□□ -1.28
SgcbP82349 Traj54-201ENSMUST00000165071 54 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm9274-201ENSMUST00000182505 984 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm8167-201ENSMUST00000183320 958 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm18350-201ENSMUST00000187395 955 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm8307-201ENSMUST00000187682 1150 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm20954-201ENSMUST00000189078 644 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm28864-201ENSMUST00000189251 644 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm29141-201ENSMUST00000190357 882 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm43471-201ENSMUST00000197550 467 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm4574-201ENSMUST00000207804 542 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm44743-201ENSMUST00000209062 386 ntBASIC7.03□□□□□ -1.28
SgcbP82349 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Gm2099-201ENSMUST00000220979 412 ntBASIC7.03□□□□□ -1.28
SgcbP82349 AC122533.2-201ENSMUST00000223772 545 ntBASIC7.03□□□□□ -1.28
SgcbP82349 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.03□□□□□ -1.28
SgcbP82349 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.03□□□□□ -1.28
SgcbP82349 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SgcbP82349 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SgcbP82349 Gm43292-201ENSMUST00000199580 2449 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SgcbP82349 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 CU024890.1-201ENSMUST00000221361 2019 ntBASIC7.03□□□□□ -1.28
SgcbP82349 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SgcbP82349 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Gm17229-202ENSMUST00000166792 1753 ntBASIC7.03□□□□□ -1.28
SgcbP82349 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SgcbP82349 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
SgcbP82349 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
SgcbP82349 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.02□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms