Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Tpm1P58771 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Tpm1P58771 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.6□□□□□ -1.19
Tpm1P58771 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Tpm1P58771 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Mir705-201ENSMUST00000102058 82 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Mir697-201ENSMUST00000102316 109 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Tpm1P58771 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Tpm1P58771 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.6□□□□□ -1.19
Tpm1P58771 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.6□□□□□ -1.19
Tpm1P58771 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
Tpm1P58771 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm14550-201ENSMUST00000117918 407 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm11258-201ENSMUST00000121086 1218 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm14990-201ENSMUST00000122354 445 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.6□□□□□ -1.19
Tpm1P58771 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm26197-201ENSMUST00000175033 115 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Mir6409-201ENSMUST00000184957 92 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm36928-201ENSMUST00000192466 694 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm37325-201ENSMUST00000194971 694 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.6□□□□□ -1.19
Tpm1P58771 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm43926-201ENSMUST00000203978 430 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm5436-201ENSMUST00000058103 643 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Tpm1P58771 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Tpm1P58771 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.6□□□□□ -1.19
Tpm1P58771 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.6□□□□□ -1.19
Tpm1P58771 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Tpm1P58771 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Tpm1P58771 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Tpm1P58771 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Tpm1P58771 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Mir760-201ENSMUST00000103257 119 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm23891-201ENSMUST00000158114 138 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm5920-201ENSMUST00000187390 853 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm18351-201ENSMUST00000188646 883 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm28070-201ENSMUST00000191502 445 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm7341-201ENSMUST00000192183 926 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Gm3511-201ENSMUST00000199823 204 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.59□□□□□ -1.19
Tpm1P58771 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 AV026068-219ENSMUST00000224148 933 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Gm22504-201ENSMUST00000082963 139 ntBASIC7.59□□□□□ -1.19
Tpm1P58771 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.59□□□□□ -1.19
Tpm1P58771 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.59□□□□□ -1.19
Tpm1P58771 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Tpm1P58771 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Tpm1P58771 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Tpm1P58771 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.2
Tpm1P58771 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Tpm1P58771 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Tpm1P58771 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Tpm1P58771 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.58□□□□□ -1.2
Tpm1P58771 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Tpm1P58771 Gm15224-201ENSMUST00000120501 388 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms