Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Msh6P54276 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Msh6P54276 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm24790-201ENSMUST00000104285 132 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm4992-201ENSMUST00000120256 768 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC8.85□□□□□ -0.99
Msh6P54276 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm23810-201ENSMUST00000175150 74 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm8192-201ENSMUST00000182196 958 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm28846-201ENSMUST00000189161 368 ntBASIC8.85□□□□□ -0.99
Msh6P54276 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 Gm10416-201ENSMUST00000197379 645 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 Gm4556-201ENSMUST00000217808 355 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Msh6P54276 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.85□□□□□ -0.99
Msh6P54276 AC131029.2-201ENSMUST00000226696 628 ntBASIC8.85□□□□□ -0.99
Msh6P54276 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Msh6P54276 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Msh6P54276 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Gm9506-201ENSMUST00000118516 320 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.84□□□□□ -0.99
Msh6P54276 Gm12244-201ENSMUST00000119500 291 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Gm26357-201ENSMUST00000158218 115 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Gm25435-201ENSMUST00000158277 267 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Gm9027-201ENSMUST00000165914 661 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Gm4956-202ENSMUST00000178869 672 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Mir7072-201ENSMUST00000184542 60 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Gm44982-201ENSMUST00000208795 471 ntBASIC8.84□□□□□ -0.99
Msh6P54276 CT009713.1-201ENSMUST00000224828 853 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Msh6P54276 Gm22351-201ENSMUST00000083925 107 ntBASIC8.84□□□□□ -0.99
Msh6P54276 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Msh6P54276 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.84□□□□□ -0.99
Msh6P54276 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Msh6P54276 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Msh6P54276 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Msh6P54276 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.83□□□□□ -1
Msh6P54276 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Msh6P54276 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Msh6P54276 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.83□□□□□ -1
Msh6P54276 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Msh6P54276 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Msh6P54276 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
Msh6P54276 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.83□□□□□ -1
Msh6P54276 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Msh6P54276 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 122.6 ms