Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox3P53784 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox3P53784 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Sox3P53784 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox3P53784 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Sox3P53784 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Sox3P53784 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.72□□□□□ -1.33
Sox3P53784 Gm11445-201ENSMUST00000119101 532 ntBASIC6.72□□□□□ -1.33
Sox3P53784 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Gm14747-201ENSMUST00000149888 984 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Gm23164-201ENSMUST00000175084 111 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Gm7266-201ENSMUST00000187999 405 ntBASIC6.72□□□□□ -1.33
Sox3P53784 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox3P53784 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Gm37901-201ENSMUST00000195107 514 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.72□□□□□ -1.33
Sox3P53784 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox3P53784 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Gm45432-201ENSMUST00000210391 416 ntBASIC6.72□□□□□ -1.33
Sox3P53784 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox3P53784 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.72□□□□□ -1.33
Sox3P53784 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox3P53784 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox3P53784 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox3P53784 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox3P53784 Gm37373-201ENSMUST00000194005 2812 ntBASIC6.72□□□□□ -1.33
Sox3P53784 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox3P53784 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sox3P53784 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox3P53784 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sox3P53784 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.71□□□□□ -1.33
Sox3P53784 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sox3P53784 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sox3P53784 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm13229-201ENSMUST00000118238 340 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm5601-201ENSMUST00000118909 972 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox3P53784 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm9005-201ENSMUST00000119908 607 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm26480-201ENSMUST00000122619 297 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm24435-201ENSMUST00000157886 110 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm25556-201ENSMUST00000158077 144 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm22728-201ENSMUST00000158087 129 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm5261-201ENSMUST00000185860 713 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm44471-201ENSMUST00000197963 100 ntBASIC6.71□□□□□ -1.34
Sox3P53784 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm19175-201ENSMUST00000199895 916 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox3P53784 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.71□□□□□ -1.34
Sox3P53784 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.71□□□□□ -1.34
Sox3P53784 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm25133-201ENSMUST00000082647 130 ntBASIC6.71□□□□□ -1.34
Sox3P53784 Gm22865-201ENSMUST00000083949 214 ntBASIC6.71□□□□□ -1.34
Sox3P53784 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Sox3P53784 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Sox3P53784 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox3P53784 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox3P53784 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms