Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm20946-201ENSMUST00000212367 461 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.82□□□□□ -1.16
Sox1P53783 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm24696-201ENSMUST00000083878 134 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm22351-201ENSMUST00000083925 107 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Sox1P53783 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Sox1P53783 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.81□□□□□ -1.16
Sox1P53783 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm13680-201ENSMUST00000119790 793 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm11796-201ENSMUST00000120208 972 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm26184-201ENSMUST00000157686 131 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm25556-201ENSMUST00000158077 144 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm27014-201ENSMUST00000182658 937 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Vis1-201ENSMUST00000183957 201 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm43836-201ENSMUST00000196532 381 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm42634-201ENSMUST00000197362 381 ntBASIC7.81□□□□□ -1.16
Sox1P53783 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gm43295-201ENSMUST00000201439 412 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Gm44896-201ENSMUST00000206190 772 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC7.81□□□□□ -1.16
Sox1P53783 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.81□□□□□ -1.16
Sox1P53783 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC7.81□□□□□ -1.16
Sox1P53783 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Gm5791-201ENSMUST00000220840 489 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sox1P53783 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 AW822252-205ENSMUST00000192662 1352 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sox1P53783 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sox1P53783 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gm45629-201ENSMUST00000209629 2546 ntBASIC7.81□□□□□ -1.16
Sox1P53783 Grip1-207ENSMUST00000130387 2780 ntTSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sox1P53783 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Sox1P53783 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sox1P53783 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.8□□□□□ -1.16
Sox1P53783 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Sox1P53783 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms