Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm3555-201ENSMUST00000160287 1395 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm28653-201ENSMUST00000185494 5276 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm1866-201ENSMUST00000120701 477 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC9.12□□□□□ -0.95
Col18a1P39061 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm25445-201ENSMUST00000158996 299 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm27219-201ENSMUST00000184633 742 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC9.12□□□□□ -0.95
Col18a1P39061 Igkv3-8-201ENSMUST00000197635 339 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm17950-201ENSMUST00000214617 646 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 AC168059.2-201ENSMUST00000224473 333 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Col18a1P39061 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm37121-201ENSMUST00000192219 2556 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm25919-201ENSMUST00000104271 132 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Gm24888-201ENSMUST00000104387 130 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Gm6181-201ENSMUST00000117187 264 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm22529-201ENSMUST00000158817 123 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm2959-201ENSMUST00000169844 621 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm8192-201ENSMUST00000182196 958 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm10416-201ENSMUST00000197379 645 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm43550-201ENSMUST00000200597 303 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm7802-201ENSMUST00000216464 262 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 AC154563.1-201ENSMUST00000228317 442 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 n-R5s36-201ENSMUST00000082998 119 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm10555-201ENSMUST00000193178 1791 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 AC159301.1-202ENSMUST00000225860 2133 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Col18a1P39061 Gm38352-201ENSMUST00000194459 2557 ntBASIC9.11□□□□□ -0.95
Col18a1P39061 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Col18a1P39061 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm12442-201ENSMUST00000118372 338 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm23343-201ENSMUST00000158964 143 ntBASIC9.1□□□□□ -0.95
Col18a1P39061 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC9.1□□□□□ -0.95
Col18a1P39061 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms