Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.15□□□□□ -1.43
P20040 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
P20040 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.15□□□□□ -1.43
P20040 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
P20040 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.14□□□□□ -1.43
P20040 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.14□□□□□ -1.43
P20040 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.14□□□□□ -1.43
P20040 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.14□□□□□ -1.43
P20040 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.14□□□□□ -1.43
P20040 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.14□□□□□ -1.43
P20040 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.14□□□□□ -1.43
P20040 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
P20040 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Gm14787-201ENSMUST00000121236 388 ntBASIC6.14□□□□□ -1.43
P20040 Gm15188-201ENSMUST00000121264 704 ntBASIC6.14□□□□□ -1.43
P20040 Gm22275-201ENSMUST00000122470 310 ntBASIC6.14□□□□□ -1.43
P20040 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.14□□□□□ -1.43
P20040 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.14□□□□□ -1.43
P20040 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Gm7244-201ENSMUST00000164658 455 ntBASIC6.14□□□□□ -1.43
P20040 Gm29354-201ENSMUST00000187613 696 ntBASIC6.14□□□□□ -1.43
P20040 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
P20040 Gm29369-201ENSMUST00000190674 615 ntBASIC6.14□□□□□ -1.43
P20040 Gm36928-201ENSMUST00000192466 694 ntBASIC6.14□□□□□ -1.43
P20040 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.14□□□□□ -1.43
P20040 Gm37325-201ENSMUST00000194971 694 ntBASIC6.14□□□□□ -1.43
P20040 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.14□□□□□ -1.43
P20040 Gm10416-201ENSMUST00000197379 645 ntBASIC6.14□□□□□ -1.43
P20040 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.14□□□□□ -1.43
P20040 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.14□□□□□ -1.43
P20040 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.14□□□□□ -1.43
P20040 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
P20040 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.14□□□□□ -1.43
P20040 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.14□□□□□ -1.43
P20040 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.14□□□□□ -1.43
P20040 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.14□□□□□ -1.43
P20040 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
P20040 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
P20040 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
P20040 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.14□□□□□ -1.43
P20040 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
P20040 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
P20040 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
P20040 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
P20040 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
P20040 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.14□□□□□ -1.43
P20040 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.14□□□□□ -1.43
P20040 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.14□□□□□ -1.43
P20040 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
P20040 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.13□□□□□ -1.43
P20040 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
P20040 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.13□□□□□ -1.43
P20040 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.13□□□□□ -1.43
P20040 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
P20040 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
P20040 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
P20040 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
P20040 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.13□□□□□ -1.43
P20040 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
P20040 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.13□□□□□ -1.43
P20040 Gm25916-201ENSMUST00000104263 131 ntBASIC6.13□□□□□ -1.43
P20040 Gm8421-201ENSMUST00000119439 305 ntBASIC6.13□□□□□ -1.43
P20040 Gm15153-201ENSMUST00000119867 274 ntBASIC6.13□□□□□ -1.43
P20040 Gm11726-201ENSMUST00000121028 424 ntBASIC6.13□□□□□ -1.43
P20040 Gm12477-201ENSMUST00000121221 571 ntBASIC6.13□□□□□ -1.43
P20040 Gm12321-201ENSMUST00000121485 804 ntBASIC6.13□□□□□ -1.43
P20040 Gm17149-201ENSMUST00000164712 375 ntBASIC6.13□□□□□ -1.43
P20040 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.13□□□□□ -1.43
P20040 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
P20040 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms