Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Gm44809-201ENSMUST00000208305 993 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Gm3800-201ENSMUST00000221086 554 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Olfr687-201ENSMUST00000098154 938 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col1a1P11087 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col1a1P11087 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Gm22523-201ENSMUST00000158696 100 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Gm20223-201ENSMUST00000199932 805 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 AC147782.1-201ENSMUST00000219169 475 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC8.11□□□□□ -1.11
Col1a1P11087 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.11□□□□□ -1.11
Col1a1P11087 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.11□□□□□ -1.11
Col1a1P11087 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col1a1P11087 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Col1a1P11087 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col1a1P11087 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col1a1P11087 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm15300-201ENSMUST00000122324 279 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Gm25550-201ENSMUST00000158079 128 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm20615-201ENSMUST00000177503 705 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col1a1P11087 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.1□□□□□ -1.11
Col1a1P11087 Mir7653-201ENSMUST00000184358 61 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Gm42584-201ENSMUST00000201404 220 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm7499-201ENSMUST00000210423 813 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm45782-201ENSMUST00000212670 366 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC8.1□□□□□ -1.11
Col1a1P11087 CT025598.1-201ENSMUST00000225140 427 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Gm22126-201ENSMUST00000083244 142 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Gm10221-201ENSMUST00000088299 309 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Col1a1P11087 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col1a1P11087 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col1a1P11087 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.1□□□□□ -1.11
Col1a1P11087 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col1a1P11087 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.09□□□□□ -1.11
Col1a1P11087 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col1a1P11087 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col1a1P11087 Gm25346-201ENSMUST00000104509 128 ntBASIC8.09□□□□□ -1.11
Col1a1P11087 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms