Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.99□□□□□ -1.29
CopeO89079 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 Mir8120-201ENSMUST00000185035 139 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.99□□□□□ -1.29
CopeO89079 Gm43160-201ENSMUST00000196453 421 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Gm7419-201ENSMUST00000209962 925 ntBASIC6.99□□□□□ -1.29
CopeO89079 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.99□□□□□ -1.29
CopeO89079 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
CopeO89079 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CopeO89079 Gm24046-201ENSMUST00000083111 165 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm7493-201ENSMUST00000085919 626 ntBASIC6.99□□□□□ -1.29
CopeO89079 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.98□□□□□ -1.29
CopeO89079 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.98□□□□□ -1.29
CopeO89079 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.98□□□□□ -1.29
CopeO89079 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.98□□□□□ -1.29
CopeO89079 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.98□□□□□ -1.29
CopeO89079 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
CopeO89079 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Gm22470-201ENSMUST00000104117 130 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm11318-201ENSMUST00000118640 961 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm8421-201ENSMUST00000119439 305 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm13222-201ENSMUST00000119638 138 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm12297-201ENSMUST00000121380 979 ntBASIC6.98□□□□□ -1.29
CopeO89079 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.98□□□□□ -1.29
CopeO89079 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.98□□□□□ -1.29
CopeO89079 Gm24782-201ENSMUST00000157641 132 ntBASIC6.98□□□□□ -1.29
CopeO89079 Mir6922-201ENSMUST00000185099 66 ntBASIC6.98□□□□□ -1.29
CopeO89079 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.98□□□□□ -1.29
CopeO89079 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.98□□□□□ -1.29
CopeO89079 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.98□□□□□ -1.29
CopeO89079 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.98□□□□□ -1.29
CopeO89079 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CopeO89079 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CopeO89079 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.98□□□□□ -1.29
CopeO89079 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
CopeO89079 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.98□□□□□ -1.29
CopeO89079 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.98□□□□□ -1.29
CopeO89079 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
CopeO89079 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.98□□□□□ -1.29
CopeO89079 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CopeO89079 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.98□□□□□ -1.29
CopeO89079 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
CopeO89079 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CopeO89079 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CopeO89079 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CopeO89079 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CopeO89079 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.97□□□□□ -1.29
CopeO89079 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.97□□□□□ -1.29
CopeO89079 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.97□□□□□ -1.29
CopeO89079 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CopeO89079 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.97□□□□□ -1.29
CopeO89079 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.97□□□□□ -1.29
CopeO89079 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CopeO89079 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CopeO89079 Gm6490-201ENSMUST00000111862 461 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms