Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm42597-201ENSMUST00000196663 1544 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hmgb3O54879 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Mir678-201ENSMUST00000102114 84 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm25276-201ENSMUST00000104300 124 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm14032-201ENSMUST00000117686 1026 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm44451-201ENSMUST00000203767 483 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm8921-201ENSMUST00000204306 649 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm5307-201ENSMUST00000204772 760 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 CT572999.1-201ENSMUST00000220315 1260 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm2915-201ENSMUST00000222565 787 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 AC107663.2-201ENSMUST00000225534 1234 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.57□□□□□ -1.52
Hmgb3O54879 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.57□□□□□ -1.52
Hmgb3O54879 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hmgb3O54879 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm37067-201ENSMUST00000195730 1628 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm22150-201ENSMUST00000104447 135 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm5759-201ENSMUST00000119203 811 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm9670-201ENSMUST00000121201 540 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm8865-201ENSMUST00000125697 430 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm19815-201ENSMUST00000175818 335 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm9451-201ENSMUST00000188491 604 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm42580-201ENSMUST00000197223 753 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm5668-201ENSMUST00000220897 436 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 AC159188.3-201ENSMUST00000224199 880 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 AC161537.1-202ENSMUST00000228450 868 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms