Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm27755-201ENSMUST00000184623 132 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm8524-201ENSMUST00000186232 379 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm6799-201ENSMUST00000186919 573 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm31123-201ENSMUST00000192094 666 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm7285-201ENSMUST00000198801 580 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm29815-201ENSMUST00000202418 178 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC154307.1-201ENSMUST00000214799 90 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Pcdh1F7BJK1 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm22271-201ENSMUST00000104035 128 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm11207-201ENSMUST00000117824 414 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm14630-201ENSMUST00000118057 246 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm11370-201ENSMUST00000120583 260 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm13649-201ENSMUST00000122325 606 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm25179-201ENSMUST00000122632 128 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm24899-201ENSMUST00000158892 73 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Mir3060-201ENSMUST00000175339 83 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm24925-201ENSMUST00000178157 107 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm23945-201ENSMUST00000179609 92 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm8604-201ENSMUST00000183150 965 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm27715-201ENSMUST00000184714 260 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm38166-201ENSMUST00000191660 471 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm43212-201ENSMUST00000198208 394 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm19254-201ENSMUST00000204828 294 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdh1F7BJK1 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms