Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm15048-201ENSMUST00000118201 954 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm13930-201ENSMUST00000118569 368 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm12219-201ENSMUST00000119198 443 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm13525-201ENSMUST00000120607 478 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm16248-201ENSMUST00000124238 243 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm17217-201ENSMUST00000166613 469 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm26570-201ENSMUST00000180672 342 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm6123-201ENSMUST00000193658 1069 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 AV026068-218ENSMUST00000223980 575 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.53□□□□□ -1.36
Use1Q9CQ56 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Use1Q9CQ56 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Mir760-201ENSMUST00000103257 119 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm11259-201ENSMUST00000120554 715 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm22948-201ENSMUST00000158561 243 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Mir6930-201ENSMUST00000183859 68 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm24826-202ENSMUST00000197298 216 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm45756-201ENSMUST00000212491 407 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm5528-201ENSMUST00000076314 480 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.52□□□□□ -1.37
Use1Q9CQ56 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Use1Q9CQ56 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms