Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm13537-201ENSMUST00000120467 267 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm11581-201ENSMUST00000122024 763 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm12317-201ENSMUST00000122307 319 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm22523-201ENSMUST00000158696 100 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Mir3095-201ENSMUST00000175552 87 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm25537-201ENSMUST00000103851 109 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm25019-201ENSMUST00000179732 110 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm7570-201ENSMUST00000215246 698 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm7768-201ENSMUST00000222988 597 ntBASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdh23Q99PF4 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm17217-201ENSMUST00000166613 469 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm5947-201ENSMUST00000179156 714 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm5645-201ENSMUST00000179597 714 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm2325-201ENSMUST00000186637 581 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm6137-201ENSMUST00000187552 578 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm44265-201ENSMUST00000203631 465 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm8058-201ENSMUST00000217247 587 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm13579-201ENSMUST00000118519 517 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm16060-201ENSMUST00000153140 478 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Mir3085-201ENSMUST00000175493 89 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm45196-201ENSMUST00000206751 825 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm26037-201ENSMUST00000158150 311 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm1972-201ENSMUST00000181606 964 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm7463-201ENSMUST00000201541 547 ntBASIC6.75□□□□□ -1.33
Cdh23Q99PF4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cdh23Q99PF4 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms