Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm9973-202ENSMUST00000220926 166 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm38249-201ENSMUST00000192560 2321 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm37140-201ENSMUST00000192914 1684 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Fbxw23-202ENSMUST00000198480 1388 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm13156-201ENSMUST00000118348 321 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm11928-201ENSMUST00000119323 437 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm16200-201ENSMUST00000120385 331 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm24592-201ENSMUST00000122505 106 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm23007-201ENSMUST00000158951 177 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm7420-201ENSMUST00000162836 842 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm5445-201ENSMUST00000180224 480 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm8614-201ENSMUST00000182528 978 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Mir6908-201ENSMUST00000184056 63 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm2617-201ENSMUST00000185690 1066 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm28149-201ENSMUST00000187102 378 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm28768-201ENSMUST00000189034 378 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm8479-201ENSMUST00000203825 718 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC156795.1-201ENSMUST00000214655 414 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm18510-201ENSMUST00000219335 1096 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm5791-201ENSMUST00000220840 489 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm18338-201ENSMUST00000222381 560 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC164297.5-201ENSMUST00000224365 198 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm5446-201ENSMUST00000091762 784 ntBASIC8.15□□□□□ -1.1
Clp1Q99LI9 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Clp1Q99LI9 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Clp1Q99LI9 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Clp1Q99LI9 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Clp1Q99LI9 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Clp1Q99LI9 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms