Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm29195-201ENSMUST00000189038 379 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm37392-201ENSMUST00000192098 516 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm38306-201ENSMUST00000193954 237 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm43558-201ENSMUST00000200155 210 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 CT572999.1-201ENSMUST00000220315 1260 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm18243-201ENSMUST00000220756 887 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm33312-201ENSMUST00000222443 332 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 AC163638.1-201ENSMUST00000224818 392 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm16391-201ENSMUST00000086601 447 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Ccdc28bQ8CEG5 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.84□□□□□ -1.32
Ccdc28bQ8CEG5 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 AC132384.7-201ENSMUST00000220198 1391 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm15730-201ENSMUST00000121828 415 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm24139-201ENSMUST00000122780 288 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm22552-201ENSMUST00000157796 337 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm24369-201ENSMUST00000175387 96 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm9149-201ENSMUST00000182724 1007 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm5851-201ENSMUST00000194132 1204 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc28bQ8CEG5 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc28bQ8CEG5 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms