Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm15158-201ENSMUST00000120577 570 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm23888-201ENSMUST00000122690 253 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm38022-201ENSMUST00000191762 403 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm22053-201ENSMUST00000083394 200 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Mir1930-201ENSMUST00000158799 84 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm16138-201ENSMUST00000159341 821 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm24157-201ENSMUST00000175265 111 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm7426-201ENSMUST00000179046 404 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Mir6241-201ENSMUST00000184225 103 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm3549-201ENSMUST00000203873 794 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm18960-201ENSMUST00000222962 713 ntBASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nup88Q8CEC0 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm22707-201ENSMUST00000103834 110 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm14251-201ENSMUST00000122133 279 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm4613-201ENSMUST00000165488 276 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm23945-201ENSMUST00000179609 92 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Mir8105-201ENSMUST00000184718 89 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm28413-201ENSMUST00000189369 291 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm4856-201ENSMUST00000192696 1091 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm43905-201ENSMUST00000204516 204 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm44279-201ENSMUST00000205154 472 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm44943-201ENSMUST00000207254 300 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nup88Q8CEC0 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.18□□□□□ -1.1
Nup88Q8CEC0 Gm9985-201ENSMUST00000044101 510 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms