Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC061963.2-201ENSMUST00000213541 2739 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm25313-201ENSMUST00000101817 116 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm15576-201ENSMUST00000117806 583 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm7910-201ENSMUST00000117896 835 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm11926-201ENSMUST00000118520 430 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm16463-201ENSMUST00000120527 721 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm15192-201ENSMUST00000121005 293 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Klra11-ps-201ENSMUST00000122033 810 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm16407-201ENSMUST00000122134 567 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm25277-201ENSMUST00000157266 324 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm4781-201ENSMUST00000167995 781 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm23287-201ENSMUST00000179427 116 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm23143-201ENSMUST00000180137 116 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Mir7058-201ENSMUST00000184637 75 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm28655-201ENSMUST00000191538 692 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm18445-201ENSMUST00000195502 774 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm42767-201ENSMUST00000198583 632 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm9289-201ENSMUST00000221269 606 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm19340-201ENSMUST00000221995 345 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 AC117202.3-201ENSMUST00000228532 310 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm5316-201ENSMUST00000050391 270 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm24871-201ENSMUST00000083099 116 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm25099-201ENSMUST00000093716 116 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Rnu5g-201ENSMUST00000093721 116 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm6982-201ENSMUST00000118752 1560 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Gm29730-201ENSMUST00000192986 1396 ntBASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim47Q8C0E3 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim47Q8C0E3 Gm14931-201ENSMUST00000111079 253 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms