Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Dalir-201ENSMUST00000188773 2170 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm13229-201ENSMUST00000118238 340 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm15009-201ENSMUST00000121387 322 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm22210-201ENSMUST00000158101 144 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm28934-201ENSMUST00000186491 346 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm8101-201ENSMUST00000192796 478 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm44245-201ENSMUST00000204304 232 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm45082-201ENSMUST00000206082 601 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm24454-201ENSMUST00000083349 132 ntBASIC6.04□□□□□ -1.44
Rif1Q6PR54 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rif1Q6PR54 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm43430-201ENSMUST00000196513 3897 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm42822-201ENSMUST00000200507 1529 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm17212-201ENSMUST00000166666 259 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm9529-201ENSMUST00000177598 579 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm26509-201ENSMUST00000180947 948 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm42663-201ENSMUST00000199883 351 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm42734-201ENSMUST00000201656 878 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm22362-201ENSMUST00000083102 134 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm42759-201ENSMUST00000195915 2439 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm42656-201ENSMUST00000201506 2305 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm26429-201ENSMUST00000104829 110 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm11257-201ENSMUST00000121313 315 ntBASIC6.03□□□□□ -1.44
Rif1Q6PR54 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rif1Q6PR54 Gm15838-201ENSMUST00000161575 180 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms