Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm15310-201ENSMUST00000117891 372 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm13878-201ENSMUST00000117986 577 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm11343-201ENSMUST00000120579 599 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm7494-201ENSMUST00000121248 441 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm8722-201ENSMUST00000121466 769 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm22275-201ENSMUST00000122470 310 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm25395-201ENSMUST00000157343 272 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm25660-201ENSMUST00000158470 104 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm9672-201ENSMUST00000166437 425 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm38022-201ENSMUST00000191762 403 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm37191-201ENSMUST00000193346 388 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm19035-202ENSMUST00000194575 959 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm43377-201ENSMUST00000201640 455 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm44411-201ENSMUST00000204172 349 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm45432-201ENSMUST00000210391 416 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm22284-201ENSMUST00000104132 132 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm14251-201ENSMUST00000122133 279 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Mir1900-201ENSMUST00000122714 78 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 BC064078-201ENSMUST00000122939 570 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm24286-201ENSMUST00000157632 128 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm4613-201ENSMUST00000165488 276 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm22132-201ENSMUST00000175316 100 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm29464-201ENSMUST00000187692 513 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm37439-201ENSMUST00000193150 856 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm44374-201ENSMUST00000199821 140 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Mir106b-201ENSMUST00000083580 82 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm16020-201ENSMUST00000084281 210 ntBASIC6.09□□□□□ -1.43
Nkx3-1P97436 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Nkx3-1P97436 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.09□□□□□ -1.44
Nkx3-1P97436 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nkx3-1P97436 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Nkx3-1P97436 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.09□□□□□ -1.44
Nkx3-1P97436 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.09□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms