Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Nphp4P59240 Gm43728-201ENSMUST00000198817 2622 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nphp4P59240 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Rnu11-201ENSMUST00000104135 134 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 Gm11341-201ENSMUST00000122316 447 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 Gm22428-201ENSMUST00000158554 132 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Gm29357-201ENSMUST00000186877 698 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Gm18789-201ENSMUST00000216115 550 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 Gm24032-201ENSMUST00000083932 159 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 CT009757.6-201ENSMUST00000220661 2312 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 AC135119.1-202ENSMUST00000228435 2203 ntBASIC9.35□□□□□ -0.91
Nphp4P59240 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.35□□□□□ -0.91
Nphp4P59240 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nphp4P59240 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nphp4P59240 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nphp4P59240 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Nphp4P59240 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nphp4P59240 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nphp4P59240 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.34□□□□□ -0.91
Nphp4P59240 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm15181-201ENSMUST00000120142 177 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm12369-201ENSMUST00000121343 942 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm22552-201ENSMUST00000157796 337 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm8183-201ENSMUST00000183134 980 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm43383-201ENSMUST00000195981 469 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm44538-201ENSMUST00000205615 348 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 AC131795.1-201ENSMUST00000219632 426 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nphp4P59240 n-R5s97-201ENSMUST00000082585 113 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nphp4P59240 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm37457-201ENSMUST00000193639 2433 ntBASIC9.34□□□□□ -0.91
Nphp4P59240 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nphp4P59240 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Nphp4P59240 Gm37518-201ENSMUST00000194930 2603 ntBASIC9.33□□□□□ -0.92
Nphp4P59240 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm4927-201ENSMUST00000219548 1318 ntBASIC9.33□□□□□ -0.92
Nphp4P59240 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nphp4P59240 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nphp4P59240 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Nphp4P59240 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Nphp4P59240 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Nphp4P59240 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm14864-201ENSMUST00000116164 1087 ntBASIC9.33□□□□□ -0.92
Nphp4P59240 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC9.33□□□□□ -0.92
Nphp4P59240 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC9.33□□□□□ -0.92
Nphp4P59240 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC9.33□□□□□ -0.92
Nphp4P59240 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Nphp4P59240 Gm26509-201ENSMUST00000180947 948 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms