Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Sox3P53784 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Sox3P53784 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm24709-201ENSMUST00000104123 132 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm25379-201ENSMUST00000104338 114 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm23768-201ENSMUST00000104440 131 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm16073-201ENSMUST00000116032 517 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm13176-201ENSMUST00000117910 477 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm11474-201ENSMUST00000120814 277 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Mir1953-201ENSMUST00000157866 89 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox3P53784 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox3P53784 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Gm28996-201ENSMUST00000190316 721 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm18995-201ENSMUST00000202981 520 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm44075-201ENSMUST00000204208 216 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.74□□□□□ -1.33
Sox3P53784 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.74□□□□□ -1.33
Sox3P53784 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.74□□□□□ -1.33
Sox3P53784 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.74□□□□□ -1.33
Sox3P53784 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.74□□□□□ -1.33
Sox3P53784 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox3P53784 Mir3068-201ENSMUST00000083004 136 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.74□□□□□ -1.33
Sox3P53784 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox3P53784 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox3P53784 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm22707-201ENSMUST00000103834 110 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm14891-201ENSMUST00000117378 596 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm11472-201ENSMUST00000121305 556 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm15644-201ENSMUST00000121764 387 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm22428-201ENSMUST00000158554 132 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm19840-201ENSMUST00000169624 882 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Gm42734-201ENSMUST00000201656 878 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm18469-201ENSMUST00000208850 439 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm45626-201ENSMUST00000210093 361 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox3P53784 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox3P53784 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox3P53784 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox3P53784 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox3P53784 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.73□□□□□ -1.33
Sox3P53784 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms