Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37609-201ENSMUST00000191778 678 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm37380-201ENSMUST00000193752 397 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm45690-201ENSMUST00000210775 246 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 CT033778.1-201ENSMUST00000224767 767 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 CT009600.1-201ENSMUST00000228771 337 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm5582-201ENSMUST00000075251 522 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col18a1P39061 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm20397-201ENSMUST00000174520 362 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm27853-201ENSMUST00000184176 250 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm27355-201ENSMUST00000185045 128 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm8929-201ENSMUST00000197781 1132 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm44361-201ENSMUST00000197960 94 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm3321-201ENSMUST00000200603 1129 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 AC153801.1-201ENSMUST00000217904 947 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 AC172989.1-201ENSMUST00000226387 513 ntBASIC9.14□□□□□ -0.95
Col18a1P39061 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col18a1P39061 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Col18a1P39061 Gm37092-201ENSMUST00000193381 1518 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm43029-201ENSMUST00000201829 1535 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Col18a1P39061 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Col18a1P39061 Gm25109-201ENSMUST00000122474 114 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm9597-201ENSMUST00000171913 602 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
Col18a1P39061 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm17790-201ENSMUST00000191545 1228 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC9.13□□□□□ -0.95
Col18a1P39061 Gm18838-201ENSMUST00000204855 886 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm45072-201ENSMUST00000208673 929 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm46223-201ENSMUST00000215196 675 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 AC154633.1-201ENSMUST00000223276 449 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.13□□□□□ -0.95
Col18a1P39061 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col18a1P39061 Gm5512-201ENSMUST00000218013 1353 ntBASIC9.13□□□□□ -0.95
Col18a1P39061 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC9.12□□□□□ -0.95
Col18a1P39061 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm35808-201ENSMUST00000204769 2602 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm26037-201ENSMUST00000158150 311 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm4617-201ENSMUST00000178993 331 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC9.12□□□□□ -0.95
Col18a1P39061 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Col18a1P39061 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm18692-201ENSMUST00000193047 511 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Col18a1P39061 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC9.12□□□□□ -0.95
Col18a1P39061 AC153529.1-201ENSMUST00000217818 370 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 AC154245.1-201ENSMUST00000224615 601 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 CT025525.1-201ENSMUST00000226325 1054 ntBASIC9.12□□□□□ -0.95
Col18a1P39061 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Col18a1P39061 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Col18a1P39061 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Col18a1P39061 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Col18a1P39061 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms