Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.14□□□□□ -1.11
Col1a1P11087 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col1a1P11087 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col1a1P11087 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Gm43864-201ENSMUST00000204452 4028 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col1a1P11087 Rnu11-201ENSMUST00000104135 134 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm6977-201ENSMUST00000121568 512 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.13□□□□□ -1.11
Col1a1P11087 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.13□□□□□ -1.11
Col1a1P11087 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Mir7235-201ENSMUST00000183796 56 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm37135-201ENSMUST00000192652 534 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm38122-201ENSMUST00000192679 885 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm43501-201ENSMUST00000202513 107 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC8.13□□□□□ -1.11
Col1a1P11087 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 AC113031.1-201ENSMUST00000227400 432 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col1a1P11087 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Col1a1P11087 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col1a1P11087 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.13□□□□□ -1.11
Col1a1P11087 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm13835-201ENSMUST00000118459 685 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm13702-201ENSMUST00000118542 825 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm9005-201ENSMUST00000119908 607 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm3076-201ENSMUST00000161613 451 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.13□□□□□ -1.11
Col1a1P11087 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col1a1P11087 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col1a1P11087 Gm10205-201ENSMUST00000087431 234 ntBASIC8.13□□□□□ -1.11
Col1a1P11087 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.13□□□□□ -1.11
Col1a1P11087 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col1a1P11087 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col1a1P11087 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col1a1P11087 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.12□□□□□ -1.11
Col1a1P11087 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Col1a1P11087 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col1a1P11087 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col1a1P11087 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.12□□□□□ -1.11
Col1a1P11087 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col1a1P11087 Gm25387-201ENSMUST00000157813 132 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Gm16557-201ENSMUST00000159182 191 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Gm20432-201ENSMUST00000173716 250 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.12□□□□□ -1.11
Col1a1P11087 Gm43555-201ENSMUST00000196588 310 ntBASIC8.12□□□□□ -1.11
Col1a1P11087 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms