Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Krtap16-1-201ENSMUST00000105050 1888 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm43031-201ENSMUST00000198500 1887 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 AC127597.2-201ENSMUST00000223947 2209 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm10797-201ENSMUST00000099661 2222 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm26014-201ENSMUST00000104405 132 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm7331-201ENSMUST00000118642 387 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm15480-201ENSMUST00000120442 519 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm12402-201ENSMUST00000120536 334 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm14425-201ENSMUST00000121240 606 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Uba52-208ENSMUST00000165126 387 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Nip7-202ENSMUST00000170962 606 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Igkv4-62-201ENSMUST00000177795 288 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm23402-201ENSMUST00000178130 107 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm26189-201ENSMUST00000179879 107 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm26928-201ENSMUST00000182674 572 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Igkv9-119-201ENSMUST00000200307 353 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm44147-201ENSMUST00000204658 94 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm45198-201ENSMUST00000206796 591 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 AC132954.2-201ENSMUST00000222400 403 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 AC134420.1-201ENSMUST00000227027 289 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm24319-201ENSMUST00000083389 107 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm45354-201ENSMUST00000199820 2557 ntBASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx1-1G3UXB3 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Pvt1-201ENSMUST00000180432 1563 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm33023-202ENSMUST00000212450 1571 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm18640-201ENSMUST00000209777 2165 ntBASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 4921509A06Rik-201ENSMUST00000171278 392 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm18604-201ENSMUST00000172535 558 ntBASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm25314-201ENSMUST00000178810 79 ntBASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm21839-201ENSMUST00000179536 378 ntBASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx1-1G3UXB3 Gm10637-201ENSMUST00000183718 828 ntTSL 3 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms