Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm6838-201ENSMUST00000172851 582 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Mir6999-201ENSMUST00000183498 61 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm27864-201ENSMUST00000183704 190 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm18970-201ENSMUST00000186040 938 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm5334-201ENSMUST00000187472 720 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm29562-201ENSMUST00000190113 904 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm29462-201ENSMUST00000191458 288 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm6321-201ENSMUST00000194460 1090 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm37371-201ENSMUST00000194837 392 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm2566-201ENSMUST00000201267 431 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm44253-201ENSMUST00000203387 628 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm44451-201ENSMUST00000203767 483 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm4259-201ENSMUST00000206489 758 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm45255-201ENSMUST00000209943 811 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm45782-201ENSMUST00000212670 366 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Mir484-201ENSMUST00000093566 67 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdh1F7BJK1 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm11393-201ENSMUST00000118019 288 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm6292-201ENSMUST00000120712 1095 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm15227-201ENSMUST00000121844 399 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm15878-201ENSMUST00000127561 306 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm22224-201ENSMUST00000157357 93 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm26371-201ENSMUST00000157829 104 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm24854-201ENSMUST00000158025 98 ntBASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdh1F7BJK1 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms