Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm22671-201ENSMUST00000104420 134 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm15049-201ENSMUST00000120474 463 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm14787-201ENSMUST00000121236 388 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm24369-201ENSMUST00000175387 96 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm20797-201ENSMUST00000177894 383 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm26736-201ENSMUST00000180425 1236 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Mir6922-201ENSMUST00000185099 66 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm28918-201ENSMUST00000188822 699 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm37533-201ENSMUST00000193848 545 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm19088-201ENSMUST00000198800 566 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm9240-201ENSMUST00000206527 742 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm45454-201ENSMUST00000211484 455 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm9289-201ENSMUST00000221269 606 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.38□□□□□ -1.39
H2afb3S4R1G7 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
H2afb3S4R1G7 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm11558-201ENSMUST00000118454 459 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm13626-201ENSMUST00000119435 402 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
H2afb3S4R1G7 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms