Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm5601-201ENSMUST00000118909 972 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm11796-201ENSMUST00000120208 972 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm15164-201ENSMUST00000122203 271 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm19840-201ENSMUST00000169624 882 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm9423-201ENSMUST00000183173 997 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm44192-201ENSMUST00000204195 556 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm44971-201ENSMUST00000206192 337 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm35638-201ENSMUST00000220724 652 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm10126-201ENSMUST00000221732 168 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm46379-201ENSMUST00000222551 265 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scrt1Q99M85 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.2□□□□□ -1.42
Scrt1Q99M85 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm12955-201ENSMUST00000119689 957 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm4660-201ENSMUST00000131499 403 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm25395-201ENSMUST00000157343 272 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm23903-201ENSMUST00000157566 131 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm24011-201ENSMUST00000157732 268 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Mir378d-201ENSMUST00000184232 110 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29048-201ENSMUST00000185342 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29403-201ENSMUST00000185491 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28234-201ENSMUST00000185657 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28248-201ENSMUST00000186093 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29633-202ENSMUST00000186217 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28829-201ENSMUST00000186231 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28261-201ENSMUST00000186417 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28815-201ENSMUST00000186751 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28608-201ENSMUST00000186860 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28122-201ENSMUST00000187088 615 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms