Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 AC154257.1-201ENSMUST00000224811 1525 ntBASIC9.26□□□□□ -0.93
Rab11fip3Q8CHD8 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm24519-201ENSMUST00000104507 132 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm9311-201ENSMUST00000118042 1269 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm12804-201ENSMUST00000121030 999 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm23888-201ENSMUST00000122690 253 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm24685-201ENSMUST00000157764 285 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm23116-201ENSMUST00000158481 67 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm4956-202ENSMUST00000178869 672 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm27018-201ENSMUST00000181136 225 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm27156-201ENSMUST00000184589 754 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm28117-201ENSMUST00000188472 371 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Ighv1-29-201ENSMUST00000194116 342 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37526-201ENSMUST00000194640 619 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm18430-201ENSMUST00000197534 682 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm19175-201ENSMUST00000199895 916 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm17822-201ENSMUST00000204307 351 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm9357-201ENSMUST00000207138 805 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 AC154640.3-201ENSMUST00000227492 846 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 AC107232.1-201ENSMUST00000227785 1503 ntBASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rab11fip3Q8CHD8 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm43970-201ENSMUST00000204346 3605 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC107763.1-202ENSMUST00000225021 2663 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm22781-201ENSMUST00000104083 137 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm25724-201ENSMUST00000104531 117 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm649-201ENSMUST00000117284 1054 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm13771-201ENSMUST00000117988 238 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm15715-201ENSMUST00000118032 283 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm22642-201ENSMUST00000175352 252 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm4373-201ENSMUST00000178571 556 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC099934.1-201ENSMUST00000200493 79 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC159188.3-201ENSMUST00000224199 880 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC124395.1-201ENSMUST00000225940 707 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Vmn1r41-202ENSMUST00000226337 888 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC164436.1-201ENSMUST00000227074 772 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 CT030238.3-201ENSMUST00000227352 875 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 AC158954.1-201ENSMUST00000228272 1006 ntBASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rab11fip3Q8CHD8 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 120 ms