Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm17170-201ENSMUST00000112785 316 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm24057-201ENSMUST00000158616 302 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm28573-201ENSMUST00000187821 380 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm28145-201ENSMUST00000189742 380 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm28400-201ENSMUST00000191332 380 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm44971-201ENSMUST00000206192 337 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm19217-201ENSMUST00000218238 328 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm22053-201ENSMUST00000083394 200 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.82□□□□□ -1.16
Ccdc38Q8CDN8 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm24986-201ENSMUST00000104452 132 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm23139-201ENSMUST00000179454 132 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm18709-201ENSMUST00000180564 489 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm5261-201ENSMUST00000185860 713 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm29357-201ENSMUST00000186877 698 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm20274-201ENSMUST00000206967 584 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Snora21-201ENSMUST00000082967 137 ntBASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc38Q8CDN8 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms