Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm12535-201ENSMUST00000121025 484 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm11581-201ENSMUST00000122024 763 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm23164-201ENSMUST00000175084 111 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm29496-201ENSMUST00000189854 693 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm43141-201ENSMUST00000199695 274 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm19175-201ENSMUST00000199895 916 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm9419-201ENSMUST00000200672 567 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm9652-201ENSMUST00000209345 163 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm45279-201ENSMUST00000210315 391 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm18914-201ENSMUST00000214625 616 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm7731-201ENSMUST00000091759 470 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.36□□□□□ -1.07
Atg4aQ8C9S8 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm22533-201ENSMUST00000158821 274 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm27156-201ENSMUST00000184589 754 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm37383-201ENSMUST00000191750 745 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm43689-201ENSMUST00000195951 427 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm44111-201ENSMUST00000204649 399 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm45122-201ENSMUST00000206376 784 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AW822073-201ENSMUST00000075305 555 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Atg4aQ8C9S8 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Mir674-201ENSMUST00000102421 100 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm25724-201ENSMUST00000104531 117 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm12174-201ENSMUST00000119853 813 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm13735-201ENSMUST00000120217 670 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm13462-201ENSMUST00000121472 961 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm8577-201ENSMUST00000122420 986 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm24157-201ENSMUST00000175265 111 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm27866-201ENSMUST00000184459 171 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms