Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Pcdh19Q80TF3 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Pcdh19Q80TF3 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Pcdh19Q80TF3 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Pcdh19Q80TF3 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC7.65□□□□□ -1.19
Pcdh19Q80TF3 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Pcdh19Q80TF3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Pcdh19Q80TF3 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm9427-201ENSMUST00000116187 651 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm12306-201ENSMUST00000117256 171 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm15160-201ENSMUST00000120553 907 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm3757-201ENSMUST00000125878 675 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm23385-201ENSMUST00000158592 295 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm19224-201ENSMUST00000190477 793 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm42760-201ENSMUST00000199814 311 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AL935138.1-201ENSMUST00000215309 196 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm5080-201ENSMUST00000220341 743 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 CT009733.1-202ENSMUST00000224941 441 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm6195-201ENSMUST00000063059 357 ntBASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Pcdh19Q80TF3 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Gm42907-201ENSMUST00000199793 2148 ntBASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Gm37150-201ENSMUST00000193900 2754 ntBASIC7.63□□□□□ -1.19
Pcdh19Q80TF3 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms