Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm20770-201ENSMUST00000193474 694 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm43215-201ENSMUST00000199108 252 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm44705-201ENSMUST00000206719 339 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm45514-201ENSMUST00000211531 689 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm18914-201ENSMUST00000214625 616 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm18409-202ENSMUST00000220105 529 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 AC154861.1-201ENSMUST00000223767 800 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm25587-201ENSMUST00000082498 166 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Shank3Q4ACU6 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm14614-201ENSMUST00000119873 384 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm25824-201ENSMUST00000157092 121 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm7463-201ENSMUST00000201541 547 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm7492-201ENSMUST00000201745 725 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm18839-201ENSMUST00000204292 670 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm18592-201ENSMUST00000221529 276 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Shank3Q4ACU6 Gm24173-201ENSMUST00000104130 128 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm20397-201ENSMUST00000174520 362 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm28455-201ENSMUST00000189105 1290 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm5886-202ENSMUST00000203957 522 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm18879-201ENSMUST00000221187 1537 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm12643-201ENSMUST00000116078 374 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm25387-201ENSMUST00000157813 132 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Gm9064-201ENSMUST00000163579 566 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC8.54□□□□□ -1.04
Shank3Q4ACU6 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 332.6 ms