Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm11474-201ENSMUST00000120814 277 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm11882-201ENSMUST00000121463 506 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm7763-201ENSMUST00000182220 1006 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm28573-201ENSMUST00000187821 380 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm28145-201ENSMUST00000189742 380 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx4Q07424 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm28400-201ENSMUST00000191332 380 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm38203-201ENSMUST00000191815 245 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm45319-201ENSMUST00000210220 318 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm4972-201ENSMUST00000211108 1254 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx4Q07424 AC154785.1-201ENSMUST00000223280 572 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Gm43181-201ENSMUST00000197001 2072 ntBASIC5.67□□□□□ -1.5
Cdx4Q07424 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx4Q07424 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx4Q07424 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm9256-201ENSMUST00000198106 1420 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm28651-202ENSMUST00000227968 2693 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm42973-201ENSMUST00000197913 3200 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 n-R5s9-201ENSMUST00000104432 117 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm23527-201ENSMUST00000104570 130 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm14943-201ENSMUST00000118056 546 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm13229-201ENSMUST00000118238 340 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm11926-201ENSMUST00000118520 430 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm6877-201ENSMUST00000119347 1101 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm11320-201ENSMUST00000119434 463 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm13038-201ENSMUST00000119886 459 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms