Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Cntn3Q07409 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cntn3Q07409 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Mir546-201ENSMUST00000102105 121 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm9432-201ENSMUST00000117810 759 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm14788-201ENSMUST00000119457 375 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm7599-201ENSMUST00000121453 796 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm11910-201ENSMUST00000121624 432 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Mir1932-201ENSMUST00000157390 90 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm25413-201ENSMUST00000158544 312 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm24551-201ENSMUST00000158645 92 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Atp2b4-208ENSMUST00000167348 243 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm18415-201ENSMUST00000177464 647 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm4308-201ENSMUST00000179735 914 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm27025-201ENSMUST00000182392 942 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm28503-201ENSMUST00000185966 147 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cntn3Q07409 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm37241-201ENSMUST00000191736 523 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm37337-201ENSMUST00000192601 993 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm37187-201ENSMUST00000193425 341 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.94□□□□□ -1.14
Cntn3Q07409 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm4602-201ENSMUST00000203198 308 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm8575-201ENSMUST00000210262 521 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Gm45269-201ENSMUST00000210359 282 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 AC118249.1-201ENSMUST00000224822 608 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 AC134414.1-201ENSMUST00000228499 1221 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Ube2nl-201ENSMUST00000085228 456 ntBASIC7.94□□□□□ -1.14
Cntn3Q07409 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cntn3Q07409 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cntn3Q07409 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cntn3Q07409 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.93□□□□□ -1.14
Cntn3Q07409 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Cntn3Q07409 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.93□□□□□ -1.14
Cntn3Q07409 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cntn3Q07409 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.93□□□□□ -1.14
Cntn3Q07409 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Cntn3Q07409 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Cntn3Q07409 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cntn3Q07409 Gm37470-201ENSMUST00000193378 2798 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 155.2 ms