Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm42708-201ENSMUST00000196332 905 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm17822-201ENSMUST00000204307 351 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm36758-201ENSMUST00000222594 310 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm6654-201ENSMUST00000118950 348 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm11796-201ENSMUST00000120208 972 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm7613-201ENSMUST00000139070 487 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm26729-201ENSMUST00000180744 352 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Mir6989-201ENSMUST00000184812 65 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm43048-201ENSMUST00000196101 388 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm20128-201ENSMUST00000196189 417 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm44342-201ENSMUST00000196874 129 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm18430-201ENSMUST00000197534 682 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm44383-201ENSMUST00000198940 129 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm3678-201ENSMUST00000218888 492 ntBASIC6.11□□□□□ -1.43
Nkx3-1P97436 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Nkx3-1P97436 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.1□□□□□ -1.43
Nkx3-1P97436 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Nkx3-1P97436 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms