Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Sec61a1P61620 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
Sec61a1P61620 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.19□□□□□ -1.42
Sec61a1P61620 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.19□□□□□ -1.42
Sec61a1P61620 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.19□□□□□ -1.42
Sec61a1P61620 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Sec61a1P61620 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.19□□□□□ -1.42
Sec61a1P61620 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.19□□□□□ -1.42
Sec61a1P61620 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sec61a1P61620 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.18□□□□□ -1.42
Sec61a1P61620 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm25614-201ENSMUST00000104013 133 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm25916-201ENSMUST00000104263 131 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm12710-201ENSMUST00000119011 216 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm11945-201ENSMUST00000120551 476 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm12181-201ENSMUST00000121448 531 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm22552-201ENSMUST00000157796 337 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm5611-201ENSMUST00000164523 852 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm6489-201ENSMUST00000178167 696 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm5445-201ENSMUST00000180224 480 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm27026-201ENSMUST00000183003 892 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm26413-201ENSMUST00000196783 126 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm5080-201ENSMUST00000220341 743 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sec61a1P61620 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sec61a1P61620 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.18□□□□□ -1.42
Sec61a1P61620 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sec61a1P61620 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.17□□□□□ -1.42
Sec61a1P61620 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sec61a1P61620 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sec61a1P61620 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Sec61a1P61620 Mir503-201ENSMUST00000102168 71 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm25546-201ENSMUST00000103977 132 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm13414-201ENSMUST00000117516 727 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm11880-201ENSMUST00000117612 399 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm25843-201ENSMUST00000122582 314 ntBASIC6.17□□□□□ -1.42
Sec61a1P61620 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms